Breaking the Reptation Trap: Escape Dynamics of Semi-Flexible Polymers in Crowded Networks

Abstract

Semi-flexible polymers in crowded environments exhibit complex dynamics that play a crucial role in various biological and material design processes. Based on the classic reptation theory, it is generally believed that semiflexible polymers are trapped within static confinements. Here we demonstrate that semi-flexible polymers are indeed trapped in short-lived kinetic cages. We have developed a novel scaling law for rotational diffusion through the examination of the polymer network at the level of an individual nanofiber and quantify the onset of entanglement and entanglement itself by introducing an effective tube diameter. We also show that understanding these dynamics is critical for interpreting the macroscopic behavior of such systems, as evidenced by our micro-rheology analysis. The insight from our study provides a rectified microscopic understanding of the dynamics of semi-flexible polymers in complex environments, yielding new principles to better understand the macroscopic behavior of crowded systems, from biophysics to materials science.