A critical branching process model for biodiversity
David J. Aldous, Lea Popovic
Abstract
Motivated as a null model for comparison with data, we study the following model for a phylogenetic tree on n extant species. The origin of the clade is a random time in the past, whose (improper) distribution is uniform on (0,∞). After that origin, the process of extinctions and speciations is a continuous-time critical branching process of constant rate, conditioned on having the prescribed number n of species at the present time. We study various mathematical properties of this model as n ∞ limits: time of origin and of most recent common ancestor; pattern of divergence times within lineage trees; time series of numbers of species; number of extinct species in total, or ancestral to extant species; and "local" structure of the tree itself. We emphasize several mathematical techniques: associating walks with trees, a point process representation of lineage trees, and Brownian limits.
Create a lesson
Related papers
Boolean Small-Ball Inequalities for Discrepancy Theory
Emrullah Akbas, Suvrit Sra
Markovian renormalisation for percolation in high-dimension: Semi-decidability of mean field behavior
Arthur Blanc-Renaudie
Point process convergence of large inradii of Poisson-Laguerre tessellations
Matthias Schulte, Martina Švarc Petráková
Interpolation of Gaussian Free Fields via Random Matrices
Gabriel Raposo
Almost-Uniform Bayesian Convergence to the Truth Is Not Characterized by Countable Additivity on Conditional Hitting Times
M. Ali Khan, Arthur Paul Pedersen, Maxwell B. Stinchcombe
The skeleton-blocks decomposition of Bienaymé trees, and applications to their local convergence
Marc Bernard, Robin Stephenson