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Metropolis Importance Sampling for Rugged Dynamical Variables

Bernd A. Berg

cond-mat.softarXiv:cond-mat/0209413

Abstract

A funnel transformation is introduced, which acts recursively from higher towards lower temperatures. It biases the a-priori probabilities of a canonical or generalized ensemble Metropolis simulation, so that they zoom in on the global energy minimum, if a funnel exists indeed. A first, crude approximation to the full transformation, called rugged Metropolis one (RM1), is tested for Met-Enkephalin. At 300 K the computational gain is a factor of two and, due to its simplicity, RM1 is well suited to replace the conventional Metropolis updating for these kind of systems.

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