Kinetics of the Melting Transition in DNA
Aaron Santos, William Klein
Abstract
We investigate the kinetics of the DNA melting transition using modified versions of the Peyrard-Dauxois-Bishop and Poland-Scheraga models that include long and short range interactions. Using Brownian dynamics and Monte Carlo simulations, we observe metastable states prior to nucleation and demonstrate that the profile and growth modes of the critical droplet can have both classical and spinodal characteristics depending on the interaction range and the temperature quench depth.
Create a lesson
Related papers
Non-Hermitian Skin Effect from Radiative Coupling in a Reciprocal Chiral Medium
Kin Hung Fung, Changhao Meng, Yixin Xiao et al.
Landau Theory for Commensurate Charge-Density Waves Coupled to Uniform Lattice Deformation
Keiji Nakatsugawa, Toshiyuki Fujii, Satoshi Tanda
PCB-Integrated CoPt Micromagnets for Magnetophoresis
Melissa Mitchell, Henrique Mira, Simon Bending et al.
Raman magnon spectroscopy of local interactions and ground state selection in Sr2IrO4
Xiang Li, Scott E. Cooper, Ahmed E. Fahmy et al.
Nonreciprocal Control of the Goos--Hänchen Shift via the Barnett Effect in Cavity Magnomechanics
Shah Fahad, Gao Xianlong
Theory of the Spinon-Mediated Witness Spin Glass in Herbertsmithite
Mitikorn Wood-Thanan, Felix Flicker