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Characteristic Length Scale of Electric Transport Properties of Genomes

C. T. Shih

physics.bio-pharXiv:physics/0509243

Abstract

A tight-binding model together with a novel statistical method are used to investigate the relation between the sequence-dependent electric transport properties and the sequences of protein-coding regions of complete genomes. A correlation parameter Ω is defined to analyze the relation. For some particular propagation length wmax, the transport behaviors of the coding and non-coding sequences are very different and the correlation reaches its maximal value Ωmax. wmax and are characteristic values for each species. The possible reason of the difference between the features of transport properties in the coding and non-coding regions is the mechanism of DNA damage repair processes together with the natural selection.

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