Modelling Meso-Scale Diffusion Processes in Stochastic Fluid Bio-Membranes
H. Rafii-Tabar, H. R. Sepangi
Abstract
The space-time dynamics of rigid inhomogeneities (inclusions) free to move in a randomly fluctuating fluid bio-membrane is derived and numerically simulated as a function of the membrane shape changes. Both vertically placed (embedded) inclusions and horizontally placed (surface) inclusions are considered. The energetics of the membrane, as a two-dimensional (2D) meso-scale continuum sheet, is described by the Canham-Helfrich Hamiltonian, with the membrane height function treated as a stochastic process. The diffusion parameter of this process acts as the link coupling the membrane shape fluctuations to the kinematics of the inclusions. The latter is described via Ito stochastic differential equation. In addition to stochastic forces, the inclusions also experience membrane-induced deterministic forces. Our aim is to simulate the diffusion-driven aggregation of inclusions and show how the external inclusions arrive at the sites of the embedded inclusions. The model has potential use in such emerging fields as designing a targeted drug delivery system.
Create a lesson
Related papers
Automatic generation of exchange-correlation response kernels
Susi Lehtola
A unified gas-kinetic wave-particle method for multiscale gas-mixture flow with an elementary chemical reaction
Cao Junzhe, Wei Yufeng, Long Wenpei et al.
Energy Yield and Lifetime Climate Classification via Machine Learning for Optimizing Photovoltaic Module Design and Materials
Youri Blom, Sofia Dutto, Alexandru Costache et al.
Rapidly Convergent Finite-Element Domain Decomposition Method With Two-Channel Transmission Conditions
Furkan Şık, Fernando L. Teixeira, Balasubramaniam Shanker
A sharp-diffuse interface model for intermittent and isolated topological transitions
Raaghav Ramani
Macroparticles with different weights relax to different temperatures in Particle-In-Cell simulations
Remi Lehe, Arianna Formenti, Justin R. Angus et al.