Dynamic disorder in receptor-ligand forced dissociation experiments
Fei Liu, Zhong-can Ou-Yang, Mitsumasa Iwamoto
Abstract
Recently experiments showed that some biological noncovalent bonds increase their lifetimes when they are stretched by an external force, and their lifetimes will decrease when the force increases further. Several specific quantitative models have been proposed to explain the intriguing transitions from the "catch-bond" to the "slip-bond". Different from the previous efforts, in this work we propose that the dynamic disorder of the force-dependent dissociation rate can account for the counterintuitive behaviors of the bonds. A Gaussian stochastic rate model is used to quantitatively describe the transitions observed recently in the single bond P-selctin glycoprotein ligand 1(PSGL-1)-P-selectin force rupture experiment [Marshall, et al., (2003) Nature 423, 190-193]. Our model agrees well to the experimental data. We conclude that the catch bonds could arise from the stronger positive correlation between the height of the intrinsic energy barrier and the distance from the bound state to the barrier; classical pathway scenario or a priori catch bond assumption is not essential.
Create a lesson
Related papers
Long-time Dynamics of Many-body Open Quantum Systems using Quantum Generating Functions
Katha Ganguly, Dario Poletti, Bijay Kumar Agarwalla
Localization Delocalization Transition in Diffusion with Adaptive Resetting
Tommer D. Keidar, Shlomi Reuveni
Quenched activity induces nonuniversal scaling in nonreciprocal XY Models and surfaces
Sudip Mukherjee, Abhik Basu
Brownian yet non-Gaussian diffusion through equilibrium nonlinear friction
Jakob Mihatsch, Andreas M. Menzel
When dissipative steady states admit thermodynamic occupation laws
Tetsu Ichitsubo
Fluctuation--response relations from an emergent Z2 symmetry in the rotating stochastic Landau model
Dhruv Kush, Nicki Mullins, Mauricio Hippert et al.